NiBabel

Access a cacophony of neuro-imaging file formats

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nibabel.trackvis.aff_from_hdr

Reggie -- the one

nibabel.trackvisΒΆ

Read and write trackvis files

digraph inheritance62ef387ce4 { rankdir=LR; ratio=compress; fontsize=14; size="6.0, 8.0"; "TrackvisFile" [shape=ellipse,URL="nibabel.trackvis.TrackvisFile.html#nibabel.trackvis.TrackvisFile",fontname=Vera Sans, DejaVu Sans, Liberation Sans, Arial, Helvetica, sans,fontsize=14,color=dodgerblue1,style=filled,height=0.75]; "HeaderError" [shape=ellipse,fontname=Vera Sans, DejaVu Sans, Liberation Sans, Arial, Helvetica, sans,fontsize=14,color=dodgerblue1,style=filled,height=0.75]; "TrackvisFileError" [shape=ellipse,fontname=Vera Sans, DejaVu Sans, Liberation Sans, Arial, Helvetica, sans,fontsize=14,color=dodgerblue1,style=filled,height=0.75]; "DataError" [shape=ellipse,fontname=Vera Sans, DejaVu Sans, Liberation Sans, Arial, Helvetica, sans,fontsize=14,color=dodgerblue1,style=filled,height=0.75]; }

Functions

aff_from_hdr(trk_hdr[, atleast_v2]) Return voxel to mm affine from trackvis header
aff_to_hdr(affine, trk_hdr[, pos_vox, set_order]) Set affine affine into trackvis header trk_hdr
empty_header([endianness, version]) Empty trackvis header
read(fileobj[, as_generator, points_space]) Read trackvis file, return streamlines, header
write(fileobj, streamlines[, hdr_mapping, ...]) Write header and streamlines to trackvis file fileobj

Classes

TrackvisFile(streamlines[, mapping, ...]) Convenience class to encapsulate trackvis file information

Exceptions

TrackvisFile(streamlines[, mapping, ...]) Convenience class to encapsulate trackvis file information