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nibabel.minc.MincImage

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class nibabel.minc.MincImage(data, affine, header=None, extra=None, file_map=None)

Class for MINC images

The MINC image class uses the default header type, rather than a specific MINC header type - and reads the relevant information from the MINC file on load.

Initialize image

The image is a combination of (array, affine matrix, header), with optional metadata in extra, and filename / file-like objects contained in the file_map mapping.

Parameters :

data : object

image data. It should be some object that retuns an array from np.asanyarray. It should have a shape attribute or property

affine : None or (4,4) array-like

homogenous affine giving relationship between voxel coordinates and world coordinates. Affine can also be None. In this case, obj.get_affine() also returns None, and the affine as written to disk will depend on the file format.

header : None or mapping or header instance, optional

metadata for this image format

extra : None or mapping, optional

metadata to associate with image that cannot be stored in the metadata of this image type

file_map : mapping, optional

mapping giving file information for this image format

class ImageArrayProxy(minc_file)

Minc implemention of array proxy protocol

The array proxy allows us to freeze the passed fileobj and header such that it returns the expected data array.

classmethod MincImage.from_file_map(klass, file_map)