SHOGUN  v1.1.0
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File List
Here is a list of all files with brief descriptions:
o*Alphabet.cpp
o*Alphabet.h
o*ANOVAKernel.cpp
o*ANOVAKernel.h
o*arpack.cpp
o*arpack.h
o*Array.h
o*Array2.h
o*Array3.h
o*AsciiFile.cpp
o*AsciiFile.h
o*AttenuatedEuclidianDistance.cpp
o*AttenuatedEuclidianDistance.h
o*AttributeFeatures.cpp
o*AttributeFeatures.h
o*AUCKernel.cpp
o*AUCKernel.h
o*Authors.mainpage
o*AveragedPerceptron.cpp
o*AveragedPerceptron.h
o*AvgDiagKernelNormalizer.h
o*BesselKernel.cpp
o*BesselKernel.h
o*BinaryClassEvaluation.h
o*BinaryFile.cpp
o*BinaryFile.h
o*BinaryStream.h
o*BitString.h
o*BrayCurtisDistance.cpp
o*BrayCurtisDistance.h
o*Cache.h
o*CanberraMetric.cpp
o*CanberraMetric.h
o*CanberraWordDistance.cpp
o*CanberraWordDistance.h
o*CauchyKernel.cpp
o*CauchyKernel.h
o*ChebyshewMetric.cpp
o*ChebyshewMetric.h
o*Chi2Kernel.cpp
o*Chi2Kernel.h
o*ChiSquareDistance.cpp
o*ChiSquareDistance.h
o*CircularKernel.cpp
o*CircularKernel.h
o*class_list.cpp
o*class_list.h
o*CombinedDotFeatures.cpp
o*CombinedDotFeatures.h
o*CombinedFeatures.cpp
o*CombinedFeatures.h
o*CombinedKernel.cpp
o*CombinedKernel.h
o*common.h
o*CommUlongStringKernel.cpp
o*CommUlongStringKernel.h
o*CommWordStringKernel.cpp
o*CommWordStringKernel.h
o*Compressor.cpp
o*Compressor.h
o*config.h
o*ConstKernel.cpp
o*ConstKernel.h
o*ContingencyTableEvaluation.cpp
o*ContingencyTableEvaluation.h
o*Converter.h
o*CosineDistance.cpp
o*CosineDistance.h
o*Cplex.cpp
o*Cplex.h
o*CPLEXSVM.cpp
o*CPLEXSVM.h
o*CrossValidation.cpp
o*CrossValidation.h
o*CustomDistance.cpp
o*CustomDistance.h
o*CustomKernel.cpp
o*CustomKernel.h
o*DataType.cpp
o*DataType.h
o*DecompressString.cpp
o*DecompressString.h
o*developerreadme.mainpage
o*DeveloperTutorial.mainpage
o*DiagKernel.cpp
o*DiagKernel.h
o*DiceKernelNormalizer.h
o*DiffusionMaps.cpp
o*DiffusionMaps.h
o*DimensionReductionPreprocessor.cpp
o*DimensionReductionPreprocessor.h
o*Distance.cpp
o*Distance.h
o*DistanceKernel.cpp
o*DistanceKernel.h
o*DistanceMachine.cpp
o*DistanceMachine.h
o*DistantSegmentsKernel.cpp
o*DistantSegmentsKernel.h
o*Distribution.cpp
o*Distribution.h
o*Documentation.mainpage
o*DomainAdaptationSVM.cpp
o*DomainAdaptationSVM.h
o*DomainAdaptationSVMLinear.cpp
o*DomainAdaptationSVMLinear.h
o*DotFeatures.cpp
o*DotFeatures.h
o*DotKernel.h
o*DummyFeatures.cpp
o*DummyFeatures.h
o*DynamicArray.h
o*DynamicObjectArray.h
o*DynArray.h
o*DynInt.h
o*DynProg.cpp
o*DynProg.h
o*EierlegendeWollmilchSauInterface.mainpage
o*EmbeddingConverter.cpp
o*EmbeddingConverter.h
o*EuclidianDistance.cpp
o*EuclidianDistance.h
o*Evaluation.h
o*Examples.mainpage
o*ExamplesLibshogun.mainpage
o*ExamplesModularCSharp.mainpage
o*ExamplesModularJava.mainpage
o*ExamplesModularLua.mainpage
o*ExamplesModularOctave.mainpage
o*ExamplesModularPython.mainpage
o*ExamplesModularR.mainpage
o*ExamplesModularRuby.mainpage
o*ExamplesStaticCmdline.mainpage
o*ExamplesStaticOctave.mainpage
o*ExamplesStaticPython.mainpage
o*ExamplesStaticR.mainpage
o*ExplicitSpecFeatures.cpp
o*ExplicitSpecFeatures.h
o*ExponentialKernel.cpp
o*ExponentialKernel.h
o*FAQ.mainpage
o*Features.cpp
o*Features.h
o*FeatureTypes.h
o*FibonacciHeap.cpp
o*FibonacciHeap.h
o*File.cpp
o*File.h
o*FirstElementKernelNormalizer.h
o*FixedDegreeStringKernel.cpp
o*FixedDegreeStringKernel.h
o*FKFeatures.cpp
o*FKFeatures.h
o*Gaussian.cpp
o*Gaussian.h
o*GaussianKernel.cpp
o*GaussianKernel.h
o*GaussianMatchStringKernel.cpp
o*GaussianMatchStringKernel.h
o*GaussianNaiveBayes.cpp
o*GaussianNaiveBayes.h
o*GaussianShiftKernel.cpp
o*GaussianShiftKernel.h
o*GaussianShortRealKernel.cpp
o*GaussianShortRealKernel.h
o*GCArray.h
o*GeodesicMetric.cpp
o*GeodesicMetric.h
o*GHMM.cpp
o*GHMM.h
o*GMM.cpp
o*GMM.h
o*GMNPLib.cpp
o*GMNPLib.h
o*GMNPSVM.cpp
o*GMNPSVM.h
o*GNPPLib.cpp
o*GNPPLib.h
o*GNPPSVM.cpp
o*GNPPSVM.h
o*GPBTSVM.cpp
o*GPBTSVM.h
o*gpdt.cpp
o*gpdt.h
o*gpdtsolve.cpp
o*gpdtsolve.h
o*gpm.cpp
o*gpm.h
o*GridSearchModelSelection.cpp
o*GridSearchModelSelection.h
o*GUIClassifier.cpp
o*GUIClassifier.h
o*GUICommands.h
o*GUIDistance.cpp
o*GUIDistance.h
o*GUIFeatures.cpp
o*GUIFeatures.h
o*GUIHMM.cpp
o*GUIHMM.h
o*GUIKernel.cpp
o*GUIKernel.h
o*GUILabels.cpp
o*GUILabels.h
o*GUIMath.cpp
o*GUIMath.h
o*GUIPluginEstimate.cpp
o*GUIPluginEstimate.h
o*GUIPreprocessor.cpp
o*GUIPreprocessor.h
o*GUISignals.h
o*GUIStructure.cpp
o*GUIStructure.h
o*GUITime.cpp
o*GUITime.h
o*HammingWordDistance.cpp
o*HammingWordDistance.h
o*Hash.cpp
o*Hash.h
o*HashedWDFeatures.cpp
o*HashedWDFeatures.h
o*HashedWDFeaturesTransposed.cpp
o*HashedWDFeaturesTransposed.h
o*HashSet.cpp
o*HashSet.h
o*HDF5File.cpp
o*HDF5File.h
o*HessianLocallyLinearEmbedding.cpp
o*HessianLocallyLinearEmbedding.h
o*Hierarchical.cpp
o*Hierarchical.h
o*HingeLoss.cpp
o*HingeLoss.h
o*Histogram.cpp
o*Histogram.h
o*HistogramIntersectionKernel.cpp
o*HistogramIntersectionKernel.h
o*HistogramWordStringKernel.cpp
o*HistogramWordStringKernel.h
o*HMM.cpp
o*HMM.h
o*IdentityKernelNormalizer.h
o*ImplicitWeightedSpecFeatures.cpp
o*ImplicitWeightedSpecFeatures.h
o*IndirectObject.h
o*init.cpp
o*init.h
o*InputParser.h
o*Installation.mainpage
o*Interfaces.mainpage
o*IntronList.cpp
o*IntronList.h
o*InverseMultiQuadricKernel.cpp
o*InverseMultiQuadricKernel.h
o*IOBuffer.cpp
o*IOBuffer.h
o*Isomap.cpp
o*Isomap.h
o*JensenMetric.cpp
o*JensenMetric.h
o*Kernel.cpp
o*Kernel.h
o*KernelDistance.cpp
o*KernelDistance.h
o*KernelLocallyLinearEmbedding.cpp
o*KernelLocallyLinearEmbedding.h
o*KernelLocalTangentSpaceAlignment.cpp
o*KernelLocalTangentSpaceAlignment.h
o*KernelMachine.cpp
o*KernelMachine.h
o*KernelNormalizer.h
o*KernelPCA.cpp
o*KernelPCA.h
o*KMeans.cpp
o*KMeans.h
o*KNN.cpp
o*KNN.h
o*KRR.cpp
o*KRR.h
o*Labels.cpp
o*Labels.h
o*lapack.cpp
o*lapack.h
o*LaplacianEigenmaps.cpp
o*LaplacianEigenmaps.h
o*LaRank.cpp
o*LaRank.h
o*LBPPyrDotFeatures.cpp
o*LBPPyrDotFeatures.h
o*LDA.cpp
o*LDA.h
o*LibLinear.cpp
o*LibLinear.h
o*libocas.cpp
o*libocas.h
o*libocas_common.h
o*libqp.h
o*libqp_splx.cpp
o*LibSVM.cpp
o*LibSVM.h
o*LibSVMFile.h
o*LibSVMMultiClass.cpp
o*LibSVMMultiClass.h
o*LibSVMOneClass.cpp
o*LibSVMOneClass.h
o*LibSVR.cpp
o*LibSVR.h
o*License.mainpage
o*LinearHMM.cpp
o*LinearHMM.h
o*LinearKernel.cpp
o*LinearKernel.h
o*LinearLocalTangentSpaceAlignment.cpp
o*LinearLocalTangentSpaceAlignment.h
o*LinearMachine.cpp
o*LinearMachine.h
o*LinearStringKernel.cpp
o*LinearStringKernel.h
o*List.h
o*LocalAlignmentStringKernel.cpp
o*LocalAlignmentStringKernel.h
o*LocalityImprovedStringKernel.cpp
o*LocalityImprovedStringKernel.h
o*LocalityPreservingProjections.cpp
o*LocalityPreservingProjections.h
o*LocallyLinearEmbedding.cpp
o*LocallyLinearEmbedding.h
o*LocalTangentSpaceAlignment.cpp
o*LocalTangentSpaceAlignment.h
o*LogKernel.cpp
o*LogKernel.h
o*LogLoss.cpp
o*LogLoss.h
o*LogLossMargin.cpp
o*LogLossMargin.h
o*LogPlusOne.cpp
o*LogPlusOne.h
o*Loss.h
o*LossFunction.h
o*LPBoost.cpp
o*LPBoost.h
o*LPM.cpp
o*LPM.h
o*Machine.cpp
o*Machine.h
o*ManhattanMetric.cpp
o*ManhattanMetric.h
o*ManhattanWordDistance.cpp
o*ManhattanWordDistance.h
o*MatchWordStringKernel.cpp
o*MatchWordStringKernel.h
o*Math.cpp
o*Math.h
o*MeanAbsoluteError.cpp
o*MeanAbsoluteError.h
o*MeanSquaredError.cpp
o*MeanSquaredError.h
o*memory.cpp
o*memory.h
o*MemoryMappedFile.h
o*Methods.mainpage
o*MinkowskiMetric.cpp
o*MinkowskiMetric.h
o*MKL.cpp
o*MKL.h
o*MKLClassification.cpp
o*MKLClassification.h
o*MKLMultiClass.cpp
o*MKLMultiClass.h
o*MKLMultiClassGLPK.cpp
o*MKLMultiClassGLPK.h
o*MKLMultiClassGradient.cpp
o*MKLMultiClassGradient.h
o*MKLMultiClassOptimizationBase.cpp
o*MKLMultiClassOptimizationBase.h
o*MKLOneClass.cpp
o*MKLOneClass.h
o*MKLRegression.cpp
o*MKLRegression.h
o*ModelSelection.cpp
o*ModelSelection.h
o*ModelSelectionParameters.cpp
o*ModelSelectionParameters.h
o*ModularInterfaces.mainpage
o*ModularTutorial.mainpage
o*MPDSVM.cpp
o*MPDSVM.h
o*MulticlassAccuracy.cpp
o*MulticlassAccuracy.h
o*MultiClassSVM.cpp
o*MultiClassSVM.h
o*MultidimensionalScaling.cpp
o*MultidimensionalScaling.h
o*MultiquadricKernel.cpp
o*MultiquadricKernel.h
o*MultitaskKernelMaskNormalizer.h
o*MultitaskKernelMaskPairNormalizer.h
o*MultitaskKernelMklNormalizer.h
o*MultitaskKernelNormalizer.h
o*MultitaskKernelPlifNormalizer.h
o*MultitaskKernelTreeNormalizer.h
o*NeighborhoodPreservingEmbedding.cpp
o*NeighborhoodPreservingEmbedding.h
o*NormOne.cpp
o*NormOne.h
o*OligoStringKernel.cpp
o*OligoStringKernel.h
o*OnlineLibLinear.cpp
o*OnlineLibLinear.h
o*OnlineLinearMachine.cpp
o*OnlineLinearMachine.h
o*OnlineSVMSGD.cpp
o*OnlineSVMSGD.h
o*Parallel.cpp
o*Parallel.h
o*Parameter.cpp
o*Parameter.h
o*ParameterCombination.cpp
o*ParameterCombination.h
o*ParameterMap.cpp
o*ParameterMap.h
o*ParseBuffer.h
o*PCA.cpp
o*PCA.h
o*Perceptron.cpp
o*Perceptron.h
o*Plif.cpp
o*Plif.h
o*PlifArray.cpp
o*PlifArray.h
o*PlifBase.h
o*PlifMatrix.cpp
o*PlifMatrix.h
o*PluginEstimate.cpp
o*PluginEstimate.h
o*PolyFeatures.cpp
o*PolyFeatures.h
o*PolyKernel.cpp
o*PolyKernel.h
o*PolyMatchStringKernel.cpp
o*PolyMatchStringKernel.h
o*PolyMatchWordStringKernel.cpp
o*PolyMatchWordStringKernel.h
o*PositionalPWM.cpp
o*PositionalPWM.h
o*PowerKernel.cpp
o*PowerKernel.h
o*pr_loqo.cpp
o*pr_loqo.h
o*PRCEvaluation.cpp
o*PRCEvaluation.h
o*Preprocessor.h
o*PruneVarSubMean.cpp
o*PruneVarSubMean.h
o*PyramidChi2.cpp
o*PyramidChi2.h
o*QPBSVMLib.cpp
o*QPBSVMLib.h
o*RandomFourierGaussPreproc.cpp
o*RandomFourierGaussPreproc.h
o*RationalQuadraticKernel.cpp
o*RationalQuadraticKernel.h
o*RealDistance.h
o*RealFileFeatures.cpp
o*RealFileFeatures.h
o*Regression.h
o*RegulatoryModulesStringKernel.cpp
o*RegulatoryModulesStringKernel.h
o*RidgeKernelNormalizer.h
o*ROCEvaluation.cpp
o*ROCEvaluation.h
o*SalzbergWordStringKernel.cpp
o*SalzbergWordStringKernel.h
o*ScatterKernelNormalizer.h
o*ScatterSVM.cpp
o*ScatterSVM.h
o*Screenshots.mainpage
o*SegmentLoss.cpp
o*SegmentLoss.h
o*SerializableAsciiFile.cpp
o*SerializableAsciiFile.h
o*SerializableAsciiReader00.cpp
o*SerializableAsciiReader00.h
o*SerializableFile.cpp
o*SerializableFile.h
o*SerializableHdf5File.cpp
o*SerializableHdf5File.h
o*SerializableHdf5Reader00.cpp
o*SerializableHdf5Reader00.h
o*SerializableJsonFile.cpp
o*SerializableJsonFile.h
o*SerializableJsonReader00.cpp
o*SerializableJsonReader00.h
o*SerializableXmlFile.cpp
o*SerializableXmlFile.h
o*SerializableXmlReader00.cpp
o*SerializableXmlReader00.h
o*Set.h
o*SGDQN.cpp
o*SGDQN.h
o*SGInterface.cpp
o*SGInterface.h
o*SGIO.cpp
o*SGIO.h
o*SGObject.cpp
o*SGObject.h
o*ShogunException.cpp
o*ShogunException.h
o*SigmoidKernel.cpp
o*SigmoidKernel.h
o*Signal.cpp
o*Signal.h
o*SimpleDistance.h
o*SimpleFeatures.cpp
o*SimpleFeatures.h
o*SimpleFile.h
o*SimpleLocalityImprovedStringKernel.cpp
o*SimpleLocalityImprovedStringKernel.h
o*SimplePreprocessor.cpp
o*SimplePreprocessor.h
o*SmoothHingeLoss.cpp
o*SmoothHingeLoss.h
o*SNPFeatures.cpp
o*SNPFeatures.h
o*SNPStringKernel.cpp
o*SNPStringKernel.h
o*soname.mainpage
o*SortUlongString.cpp
o*SortUlongString.h
o*SortWordString.cpp
o*SortWordString.h
o*SparseDistance.h
o*SparseEuclidianDistance.cpp
o*SparseEuclidianDistance.h
o*SparseFeatures.cpp
o*SparseFeatures.h
o*SparseKernel.h
o*SparsePolyFeatures.cpp
o*SparsePolyFeatures.h
o*SparsePreprocessor.h
o*SparseSpatialSampleStringKernel.cpp
o*SparseSpatialSampleStringKernel.h
o*SpectrumMismatchRBFKernel.cpp
o*SpectrumMismatchRBFKernel.h
o*SpectrumRBFKernel.cpp
o*SpectrumRBFKernel.h
o*SphericalKernel.cpp
o*SphericalKernel.h
o*SplineKernel.cpp
o*SplineKernel.h
o*SplittingStrategy.cpp
o*SplittingStrategy.h
o*SqrtDiagKernelNormalizer.h
o*SquaredHingeLoss.cpp
o*SquaredHingeLoss.h
o*SquaredLoss.cpp
o*SquaredLoss.h
o*ssl.cpp
o*ssl.h
o*StaticCommandLineInterface.mainpage
o*StaticInterfaces.mainpage
o*StaticOctaveInterface.mainpage
o*StaticPythonInterface.mainpage
o*StaticRInterface.mainpage
o*StaticTutorial.mainpage
o*Statistics.cpp
o*Statistics.h
o*StratifiedCrossValidationSplitting.cpp
o*StratifiedCrossValidationSplitting.h
o*StreamingAsciiFile.cpp
o*StreamingAsciiFile.h
o*StreamingDotFeatures.cpp
o*StreamingDotFeatures.h
o*StreamingFeatures.cpp
o*StreamingFeatures.h
o*StreamingFile.cpp
o*StreamingFile.h
o*StreamingFileFromFeatures.cpp
o*StreamingFileFromFeatures.h
o*StreamingFileFromSimpleFeatures.h
o*StreamingFileFromSparseFeatures.h
o*StreamingFileFromStringFeatures.h
o*StreamingSimpleFeatures.cpp
o*StreamingSimpleFeatures.h
o*StreamingSparseFeatures.cpp
o*StreamingSparseFeatures.h
o*StreamingStringFeatures.cpp
o*StreamingStringFeatures.h
o*StreamingVwCacheFile.cpp
o*StreamingVwCacheFile.h
o*StreamingVwFeatures.cpp
o*StreamingVwFeatures.h
o*StreamingVwFile.cpp
o*StreamingVwFile.h
o*StringDistance.h
o*StringFeatures.cpp
o*StringFeatures.h
o*StringFileFeatures.cpp
o*StringFileFeatures.h
o*StringKernel.h
o*StringPreprocessor.h
o*SubGradientLPM.cpp
o*SubGradientLPM.h
o*SubGradientSVM.cpp
o*SubGradientSVM.h
o*Subset.cpp
o*Subset.h
o*SVM.cpp
o*SVM.h
o*SVM_libsvm.cpp
o*SVM_libsvm.h
o*SVM_linear.cpp
o*SVM_linear.h
o*SVMLight.cpp
o*SVMLight.h
o*SVMLightOneClass.cpp
o*SVMLightOneClass.h
o*SVMLin.cpp
o*SVMLin.h
o*SVMOcas.cpp
o*SVMOcas.h
o*SVMSGD.cpp
o*SVMSGD.h
o*SVRLight.cpp
o*SVRLight.h
o*SyntaxHighLight.h
o*TanimotoDistance.cpp
o*TanimotoDistance.h
o*TanimotoKernelNormalizer.h
o*TensorProductPairKernel.cpp
o*TensorProductPairKernel.h
o*Time.cpp
o*Time.h
o*TOPFeatures.cpp
o*TOPFeatures.h
o*Trie.cpp
o*Trie.h
o*Tron.cpp
o*Tron.h
o*TStudentKernel.cpp
o*TStudentKernel.h
o*Tutorial.mainpage
o*v_array.h
o*VarianceKernelNormalizer.h
o*Version.cpp
o*Version.h
o*versionstring.h
o*VowpalWabbit.cpp
o*VowpalWabbit.h
o*vw_common.h
o*vw_constants.h
o*vw_example.cpp
o*vw_example.h
o*vw_label.cpp
o*vw_label.h
o*vw_math.cpp
o*vw_math.h
o*VwAdaptiveLearner.cpp
o*VwAdaptiveLearner.h
o*VwCacheReader.cpp
o*VwCacheReader.h
o*VwCacheWriter.cpp
o*VwCacheWriter.h
o*VwEnvironment.cpp
o*VwEnvironment.h
o*VwLearner.h
o*VwNativeCacheReader.cpp
o*VwNativeCacheReader.h
o*VwNativeCacheWriter.cpp
o*VwNativeCacheWriter.h
o*VwNonAdaptiveLearner.cpp
o*VwNonAdaptiveLearner.h
o*VwParser.cpp
o*VwParser.h
o*VwRegressor.cpp
o*VwRegressor.h
o*WaveKernel.cpp
o*WaveKernel.h
o*WaveletKernel.cpp
o*WaveletKernel.h
o*WDFeatures.cpp
o*WDFeatures.h
o*WDSVMOcas.cpp
o*WDSVMOcas.h
o*WeightedCommWordStringKernel.cpp
o*WeightedCommWordStringKernel.h
o*WeightedDegreePositionStringKernel.cpp
o*WeightedDegreePositionStringKernel.h
o*WeightedDegreeRBFKernel.cpp
o*WeightedDegreeRBFKernel.h
o*WeightedDegreeStringKernel.cpp
o*WeightedDegreeStringKernel.h
\*ZeroMeanCenterKernelNormalizer.h

SHOGUN Machine Learning Toolbox - Documentation